Glycan details/Associated protein: Difference between revisions
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==Associated Protein== | ==Associated Protein== | ||
[[File:Glycan Associated Protein Screenshot.png|thumb|Screenshot of the General section on the [[Glycan details]] page in GlyGen.]] | |||
A list of proteins and the site at which they are glycosylated with the glycan is presented. The following columns are presented in the table: | A list of proteins and the site at which they are glycosylated with the glycan is presented. The following columns are presented in the table: | ||
* '''Source''' - GlyGen evidence linking to the databases and papers that provided the glycosylation information | *'''Source''' - GlyGen evidence linking to the databases and papers that provided the glycosylation information | ||
* '''Protein Name''' - The recommended protein name as per UniProtKB database. Eg. Epidermal growth factor receptor | *'''Protein Name''' - The recommended protein name as per UniProtKB database. Eg. Epidermal growth factor receptor | ||
* '''UniProtKB Accession''' - Accession assigned to the protein in the UniProtKB database. Eg. P00533-1 | *'''UniProtKB Accession''' - Accession assigned to the protein in the UniProtKB database. Eg. P00533-1 | ||
* '''Position''' - Amino acid residue of the given protein along with its position. Eg. Asn294 | *'''Position''' - Amino acid residue of the given protein along with its position. Eg. Asn294 | ||
* '''Organism''' - Name of the organism that is the source of the protein sequence. Eg. Homo sapiens<br /> | *'''Organism''' - Name of the organism that is the source of the protein sequence. Eg. Homo sapiens<br /> | ||
==Source of information== | ==Source of information== | ||
Latest revision as of 03:56, 29 June 2022
The Associated Protein section of the Glycan Details page in GlyGen provides a list of proteins glycosylated with the glycan.
Associated Protein
A list of proteins and the site at which they are glycosylated with the glycan is presented. The following columns are presented in the table:
- Source - GlyGen evidence linking to the databases and papers that provided the glycosylation information
- Protein Name - The recommended protein name as per UniProtKB database. Eg. Epidermal growth factor receptor
- UniProtKB Accession - Accession assigned to the protein in the UniProtKB database. Eg. P00533-1
- Position - Amino acid residue of the given protein along with its position. Eg. Asn294
- Organism - Name of the organism that is the source of the protein sequence. Eg. Homo sapiens
Source of information
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Data access
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Data harmonization
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Data filtering
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