Glycan details/Associated protein: Difference between revisions
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The Associated Protein section of the [[Glycan details|Glycan Details]] page in GlyGen provides a list of proteins glycosylated with the glycan. | The Associated Protein section of the [[Glycan details|Glycan Details]] page in GlyGen provides a list of proteins glycosylated with the glycan. | ||
==Associated Protein== | |||
[[File:Glycan Associated Protein Screenshot.png|thumb|Screenshot of the General section on the [[Glycan details]] page in GlyGen.]] | |||
A list of proteins and the site at which they are glycosylated with the glycan is presented. The following columns are presented in the table: | |||
*'''Source''' - GlyGen evidence linking to the databases and papers that provided the glycosylation information | |||
*'''Protein Name''' - The recommended protein name as per UniProtKB database. Eg. Epidermal growth factor receptor | |||
*'''UniProtKB Accession''' - Accession assigned to the protein in the UniProtKB database. Eg. P00533-1 | |||
*'''Position''' - Amino acid residue of the given protein along with its position. Eg. Asn294 | |||
*'''Organism''' - Name of the organism that is the source of the protein sequence. Eg. Homo sapiens<br /> | |||
==Source of information== | |||
{{Expand section|small=no}} | |||
==Data access== | |||
{{Expand section|small=no}} | |||
==Data harmonization== | |||
{{Expand section|small=no}} | |||
==Data filtering== | |||
{{Expand section|small=no}} |
Latest revision as of 03:56, 29 June 2022
The Associated Protein section of the Glycan Details page in GlyGen provides a list of proteins glycosylated with the glycan.
Associated Protein
![](/images/thumb/5/58/Glycan_Associated_Protein_Screenshot.png/300px-Glycan_Associated_Protein_Screenshot.png)
A list of proteins and the site at which they are glycosylated with the glycan is presented. The following columns are presented in the table:
- Source - GlyGen evidence linking to the databases and papers that provided the glycosylation information
- Protein Name - The recommended protein name as per UniProtKB database. Eg. Epidermal growth factor receptor
- UniProtKB Accession - Accession assigned to the protein in the UniProtKB database. Eg. P00533-1
- Position - Amino acid residue of the given protein along with its position. Eg. Asn294
- Organism - Name of the organism that is the source of the protein sequence. Eg. Homo sapiens
Source of information
This section needs expansion. You can help by adding to it. |
Data access
This section needs expansion. You can help by adding to it. |
Data harmonization
This section needs expansion. You can help by adding to it. |
Data filtering
This section needs expansion. You can help by adding to it. |