Revision as of 17:41, 1 May 2020

Welcome to GlyGen Wiki,

The MediaWiki for the GlyGen project. This wiki system provides complementary information to the GlyGen Portal and is divided into the following main sections: Help for the GlyGen Portal, Help for the GlyGen Data Repository, Help for the GlyGen Web Service API, Help for the GlyGen Triplestore, Frequently Asked Questions and scientific articles.

News

2020-04-08

A new model of the SARS-CoV-2 spike glycoprotein with side specific glycan structures was created by Prof. Dr. Robert Woods' group from the Complex Carbohydrate Research Center.

2020-03-30

An initial model of the SARS-CoV-2 spike glycoprotein was created by Prof. Dr. Robert Woods' group from the Complex Carbohydrate Research Center of the University of Georgia.

GlyGen Portal

The GlyGen Portal is the web interface allowing browser based access to the GlyGen data. The portal supports searching for glycans and proteins, display of detailed glycan data and protein data as well as export features to save the data to the local system. The portal also provides access to the other resources of the GlyGen project and digital resources such as posters, presentations and videos.

GlyGen Data Repository

Frequently Asked Questions

The FAQ section contains a list of questions asked by users regarding using the portal, API and SPARQL endpoint as well as questions related to the data, data integration and quality control.

GlyGen Web Service API

GlyGen Triplestore

External links

Official

GlyGen official website

Glycan search

Glycan search — Go to GlyGen website to perform Glycan Search
Simple search
Advanced search
Tutorial — Learn how to use simple and advanced searches.

Protein search

Protein search — Go to GlyGen website to perform Protein Search
Simple search
Advanced search
Tutorial — Learn how to use Simple and Advanced searches.

Glycoprotein search

Glycoprotein search — Go to GlyGen website to perform Glycoprotein Search
Simple search
Advanced search
Tutorial — Learn how to use Simple and Advanced searches.

Quick search

Quick search — You can search by glycan, protein, species, and disease.

Try Me

Try me — To perform search select one of the frequently asked questions.

List pages

Glycan list — GlyTouCan Accession: G17689DH
Protein list — UniProtKB Accession: P14210-1
Glycoprotein list — UniProtKB Accession: P14210-1

Detail pages

Glycan details — GlyTouCan Accession: G17689DH
Protein details — UniProtKB Accession: P14210-1
Glycoprotein details — UniProtKB Accession: P14210-1

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      <div style="margin:0.4em; text-align:center;">
          <div style="font-size:160%; padding:.1em;">Welcome to GlyGen Wiki,</div>
-         <div style="font-size:100%;">the [https://www.mediawiki.org/wiki/MediaWiki mediawiki] for the GlyGen project. This wiki system provides complementary information to the [https://glygen.org GlyGen Portal] and is divided into the following main sections: Help for the [[GlyGen portal]], Help for the [[GlyGen data repository]], Help for the [[GlyGen web service API]], Help for the [[GlyGen triplestore]], [[Frequently ask questions|frequently asked questions]] and scientific articles.</div>
+         <div style="font-size:100%;">The [https://www.mediawiki.org/wiki/MediaWiki MediaWiki] for the GlyGen project. This wiki system provides complementary information to the [https://glygen.org GlyGen Portal] and is divided into the following main sections: Help for the [[GlyGen Portal]], Help for the [[GlyGen Data Repository]], Help for the [[GlyGen Web Service API]], Help for the [[GlyGen Triplestore]], [[Frequently ask questions|Frequently Asked Questions]] and scientific articles.</div>
      </div>
 </div>
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 <div id="ggw_row2" style="display: flex; flex-flow: row wrap; justify-content: space-between; padding: 0; margin: 0 -5px 0 -5px;">
      <div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
-         <h3>[[GlyGen portal|GlyGen Portal]]</h3>
+         <h3>[[GlyGen Portal|GlyGen Portal]]</h3>
          <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|GlyGen portal}}
+{{main|GlyGen Portal}}
-The [[GlyGen portal]] is the web interface allowing browser based access to the GlyGen data. The portal supports searching for [[Glycan search|glycans]] and [[Protein search|proteins]], display of detailed [[Glycan details|glycan data]] and [[Protein details|protein data]] as well as export features to save the data to the local system. The portal also provides access to the other resources of the GlyGen project and digital resources such as posters, presentations and videos.
+The [[GlyGen Portal]] is the web interface allowing browser based access to the GlyGen data. The portal supports searching for [[Glycan search|glycans]] and [[Protein search|proteins]], display of detailed [[Glycan details|glycan data]] and [[Protein details|protein data]] as well as export features to save the data to the local system. The portal also provides access to the other resources of the GlyGen project and digital resources such as posters, presentations and videos.
          </div>
      </div>
      <div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
-         <h3>[[GlyGen data repository]]</h3>
+         <h3>[[GlyGen Data Repository]]</h3>
          <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|GlyGen data repository}}
+{{main|GlyGen Data Repository}}
 {{Expand section|small=no}}
          </div>
      </div>
      <div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
-         <h3>[[Frequently asked questions]]</h3>
+         <h3>[[Frequently Asked Questions]]</h3>
 	<div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|Frequently asked questions}}
+{{main|Frequently Asked Questions}}
 The FAQ section contains a list of questions asked by users regarding using the portal, API and SPARQL endpoint as well as questions related to the data, data integration and quality control.
          </div>
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 <div id="ggw_row3" style="display: flex; flex-flow: row wrap; justify-content: space-between; padding: 0; margin: 0 -5px 0 -5px;">
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-         <h3>[[GlyGen web service API]]</h3>
+         <h3>[[GlyGen Web Service API]]</h3>
          <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|GlyGen web service API}}
+{{main|GlyGen Web Service API}}
 {{Expand section|small=no}}
          </div>
      </div>
      <div style="flex: 1; margin: 5px; min-width: 210px; border: 1px solid #CCC;	padding: 0 10px 10px 10px; box-shadow: 0 2px 2px rgba(0,0,0,0.1); background: #f5faff;">
-         <h3>[[GlyGen triplestore]]</h3>
+         <h3>[[GlyGen Triplestore]]</h3>
          <div style="border-top: 1px solid #CCC; padding-top: 0.5em;">
-{{main|GlyGen triplestore}}
+{{main|GlyGen Triplestore}}
 {{Expand section|small=no}}
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 *[http://glygen.org/glycan_search.html#simple_search Simple search]
 *[http://glygen.org/glycan_search.html#advanced_search Advanced search]
-*[http://glygen.org/glycan_search.html#tutorial tutorial] &mdash; Learn how to use simple and advanced searches.
+*[http://glygen.org/glycan_search.html#tutorial Tutorial] &mdash; Learn how to use simple and advanced searches.
 ;Protein search

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