Release notes

Version 2.2

Main article: Portal release notes/2.2

Main article: Data release notes/2.2

This version was released on September 30th, 2023.

• Implement server side pagination for tables (protein, glycan and publication details page).
• Add support to display card level please wait icon for table pagination.
• Interface changes for table in Referenced Proteins section on publication details page.
• Add biomarker details page to the GlyGen portal.
• Add biomarker section on protein, glycan, publication and motif details page.
• Support Biomarker Disease and Biomarker Type search from protein and glycan search.
• Biomarker disease typeahead support on protein and glycan search.
• Support Biomarker Type filters from protein and glycan list pages.
• Add Tab greying feature to indicate no data is available in the table present on tabs (all pages).
• Updated grant information on GlyGen portal.
• Add support to download protein table and glycan table in the components section of biomarker details page.
• Add support to display Glycoslation summary data from section_stats information on protein details and publication details page.
• Add CFDE and GSA buttons with links on the GlyGen portal home page.
• Add a Third Party Tools submenu to GlyGen portal menu.
• Add a link from GlyGen menu to "Gene and Drug Landing Page Aggregator" site.
• Bug fixing.

Version 2.1

Main article: Portal release notes/2.1

Main article: Data release notes/2.1.1

This version was released on July 3rd, 2023.

• Download icon for tabular data section (all pages).
• Send filter as part of download request on list pages.
• Download API changes on list and details pages.
• Change Opacity, Size of carbohydrates in 3d glycan structures.
• "Please wait" icon for all downloads.
• Integrate Nathans Sandbox links into frontend.
• Update Raja's Photo in About page.
• 3D structures not visible on beta.
• Updated Glycan, Protein and Proteoform datasets.
• Removal of SNV/mutation entries from COSMIC resource from the human_protein_mutation_cancer.csv dataset [GLY_000024].
• Updated SPARQL endpoint with newer data.
• New interface and search functionality on data.glygen.org.
• Bug fixing.

Version 2.0

Main article: Portal release notes/2.0

Main article: Data release notes/2.0.3

This version was released on April 12th, 2023.

• Protein and Glycan datasets updated with new release data
• O-GlcNAc data added from O-GlcNAc atlas (GLY_000708, GLY_000709, GLY_000710, GLY_000711).
• O-Glucosylation data added from the dataset shared from the lab of Robert S Haltiwanger by Daniel Williamson (author) (GLY_000716).
• Glyconnect cross-references datasets created and added to the GlyGen Mapper tool.
• Glycan Structure Dictionary dataset updated GLY_000557.
• SNV/ cancer mutation data from OncoMX was updated. The new data is as per genome assembly reference GRCh38.
• Names of few citations files changed. Missing citations files were created.
• Addition of new monosaccharides.
• Addition of biomarker data to data.glygen.org (Glycan - GLY_000737 | Protein - GLY_000625)
• Migration to recent React Framework.
• 3D structure viewer for Glycans.
• N-Glycan Gnome Browser integration.
• Update About us page.
• Update menu structure.
• BLAST Improvements.
• BLAST and GSD on Homepage.
• Accession history error messages.
• Bug fixing.