GlyGen and Foundation for Advanced Education in the Sciences (FAES) 2024 Workshop: Difference between revisions

Latest revision as of 18:09, 17 April 2024

BIOF-GLYC 031 - Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics

Course Description Academic Programs at the NIH (FAES) and the GlyGen team is pleased to offer a one day, in-person, workshop at the National Institutes of Health, Bethesda campus on June 10, 2024.

Overview

The workshop will introduce participants to “GlycoBioInformatics Tools” and provide hands on exercises on GlyGen: Computational and Informatics Resources for Glycoscience.

The workshop is comprised of two sessions. In the morning, the instructors will share an overview of glycobiology and glycomics and will explore common bioinformatics tools that are used to analyze genes, proteins and glycans. In the afternoon, you will be guided by the instructors on how to use GlyGen and explore a variety of functions through hands-on exercises.

This workshop will be team taught by the GlyGen Team.

Registration

To register, click on "Add to Cart"

Total cost includes $75 non-refundable technology fee per course when applicable.


Course Name	Section Title	Schedule and Location	Total Cost
BIOF-GLYC 031 - Student, Trainee, Fellow, .Gov, .Mil	Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics	Type: Lab Days: M Time: 8:30AM to 5:30PM ET Dates: Jun 10, 2024 Location: NIH Main Campus	$199.00
BIOF-GLYC 031 - Academic Pro	Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics	Type: Lab Days: M Time: 8:30AM to 5:30PM ET Dates: Jun 10, 2024 Location: NIH Main Campus	$500.00
BIOF-GLYC 031 - General	Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics	Type: Lab Days: M Time: 8:30AM to 5:30PM ET Dates: Jun 10, 2024 Location: NIH Main Campus	$750.00

Agenda

Morning Session (Lecture)

A bioinformatics approach to studying genes, proteins and glycans.
Glycobiology - What are glycans?
- Importance of glycans in health and disease
- Common bioinformatic tools to analyze genes, proteins and glycans
How to find them
- Overview of glycomics tools (predication, mass spec, cartoon, etc.)
- Structure and use of common knowledgebases and tools that can be used to explore protein and glycan function
Where to find them
- Overview about Glycomics and GlycoProteomics databases/knowledge bases
- Teaser: What is GlyGen

Lunch break

Afternoon Session (Hands-On)

GlyGen: Find glycans and proteins
- Search glycan →List page → Details page
- Search protein → List page → Details page
GlyGen: Understanding subsumption
GlyGen: Glycosylation
- Search protein by glycosylation
- Filtering on list pages
- Browsing glycosylation
GlyGen: Exploring sites
- Sequence viewer
- Protvista
- Site search
GlyGen: Super search and other searches
Sandbox: Enzymes and pathways
GlyGen: Tools
- Mapper
- Blast
- Sequence Lookup
- Motif Wiki
Open Question Session

Microcredential(s)

This workshop applies toward the Bioinformatics Endeavor digital badge.

Prerequisites

Software/Equipment Requirements

It is preferred that you bring your own laptop; however, FAES can lend a laptop if needed. Please contact registrar@faes.org prior to the workshop to inquire.

Additional Information

Credit

Although no grades are given for courses, each participant will receive Continuing Education Units (CEUs) based on the number of contact hours. One CEU is equal to ten contact hours. Upon completion of the course each participant will receive a certificate, showing completion of the workshop and 0.7 CEUs.

Self-Funded Participant

A limited number of scholarships are available. Apply here.

Refund

Follow the link to review FAES Tuition Refund Policy.

Funding Justification Guide

Some labs and institutes may have specific funds set aside for trainees to continue their education and professional development. FAES has created a guide intended to help trainees request funds that may be available and, if they are available, request use of the training funds for continued professional development. More details.

@@ Line 1: / Line 1: @@
 '''<big>BIOF-GLYC 031 - Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics</big>'''
 '''Course Description'''
-''Academic Programs at the NIH (FAES) and the GlyGen team is pleased to offer a one day, in-person, workshop at the National Institutes of Health, Bethesda campus on June 10, 2024.''
+Academic Programs at the NIH (FAES) and the GlyGen team is pleased to offer a one day, in-person, workshop at the National Institutes of Health, Bethesda campus on June 10, 2024.
 '''Overview'''
-''The workshop will introduce participants to “GlycoBioInformatics Tools” and provide hands on exercises on [https://www.glygen.org GlyGen: Computational and Informatics Resources for Glycoscience].
+The workshop will introduce participants to “GlycoBioInformatics Tools” and provide hands on exercises on [https://www.glygen.org GlyGen: Computational and Informatics Resources for Glycoscience]''. ''
 The workshop is comprised of two sessions.  In the morning, the instructors will share an overview of glycobiology and glycomics and will explore common bioinformatics tools that are used to analyze genes, proteins and glycans. In the afternoon, you will be guided by the instructors on how to use GlyGen and explore a variety of functions through hands-on exercises.
@@ Line 12: / Line 12: @@
 This workshop will be team taught by the [https://www.glygen.org/about/ GlyGen Team].
-'''Agenda'''
+== Registration ==
+To register, click on "[https://education.faes.org/search/publicCourseSearchDetails.do?method=load&courseId=2529149 Add to Cart]"
+Total cost includes $75 non-refundable technology fee per course when applicable.
+{| class="wikitable"
+|+
+|-
+! Course Name !! Section Title !! Schedule and Location
+!Total Cost
+|-
+| '''BIOF-GLYC 031 - Student, Trainee, Fellow, .Gov, .Mil'''|| Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics || Type: Lab
+Days: M
+Time: 8:30AM to 5:30PM ET
+Dates: Jun 10, 2024
+Location: NIH Main Campus
+|$199.00
+|-
+| '''BIOF-GLYC 031 - Academic Pro'''|| Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics || Type: Lab
+Days: M
+Time: 8:30AM to 5:30PM ET
+Dates: Jun 10, 2024
+Location: NIH Main Campus
+|$500.00
+|-
+| '''BIOF-GLYC 031 - General'''|| Unraveling the Interplay of Genes, Proteins, and Glycans through Bioinformatics || Type: Lab
+Days: M
+Time: 8:30AM to 5:30PM ET
+Dates: Jun 10, 2024
+Location: NIH Main Campus
+|$750.00
+|}
+== Agenda ==
 '''Morning Session (Lecture)'''
-A bioinformatics approach to studying genes, proteins and glycans.
+* A bioinformatics approach to studying genes, proteins and glycans.
-Glycobiology - What are glycans?
+* Glycobiology - What are glycans?
-Importance of glycans in health and disease
+** Importance of glycans in health and disease
-Common bioinformatic tools to analyze genes, proteins and glycans
+** Common bioinformatic tools to analyze genes, proteins and glycans
-How to find them
+* How to find them
-Overview of glycomics tools (predication, mass spec, cartoon, etc.)
+** Overview of glycomics tools (predication, mass spec, cartoon, etc.)
-Structure and use of common knowledgebases and tools that can be used to explore protein and glycan function
+** Structure and use of common knowledgebases and tools that can be used to explore protein and glycan function
-Where to find them
+* Where to find them
-Overview about Glycomics and GlycoProteomics databases/knowledge bases
+** Overview about Glycomics and GlycoProteomics databases/knowledge bases
-Teaser: What is GlyGen
+** Teaser: What is GlyGen
 '''Lunch break'''
@@ Line 32: / Line 72: @@
 * GlyGen: Find glycans and proteins
-Search glycan →List page → Details page
+** Search glycan →List page → Details page
-Search protein → List page → Details page
+** Search protein → List page → Details page
 * GlyGen: Understanding subsumption
 * GlyGen: Glycosylation
-Search protein by glycosylation
+** Search protein by glycosylation
-Filtering on list pages
+** Filtering on list pages
-Browsing glycosylation
+** Browsing glycosylation
 * GlyGen: Exploring sites
-Sequence viewer
+** Sequence viewer
-Protvista
+** Protvista
-Site search
+** Site search
 * GlyGen: Super search and other searches
 * Sandbox: Enzymes and pathways
 * GlyGen: Tools
-Mapper
+** Mapper
-Blast
+** Blast
-Sequence Lookup
+** Sequence Lookup
-Motif Wiki
+** Motif Wiki
 * Open Question Session
+== Microcredential(s) ==
+This workshop applies toward the [https://education.faes.org/contentManagement.do?method=load&code=CM000049 Bioinformatics Endeavor] digital badge.
+[[File:Bioinformatics Endeavor.png|left|242x242px]]
+== Prerequisites ==
+'''Software/Equipment Requirements'''
+It is preferred that you bring your own laptop; however, FAES can lend a laptop if needed. Please contact registrar@faes.org prior to the workshop to inquire.
+== Additional Information ==
+'''Credit'''
+Although no grades are given for courses, each participant will receive Continuing Education Units (CEUs) based on the number of contact hours. One CEU is equal to ten contact hours. Upon completion of the course each participant will receive a certificate, showing completion of the workshop and 0.7 CEUs.
+'''Self-Funded Participant'''
+A limited number of scholarships are available. [https://faes.formstack.com/forms/faes_scholarship_application_workshop_2022_23 Apply here].
+'''Refund'''
+Follow the link to review [https://education.faes.org/contentManagement.do?method=load&code=CM000011 FAES Tuition Refund Policy].
+'''Funding Justification Guide'''
+Some labs and institutes may have specific funds set aside for trainees to continue their education and professional development. FAES has created a guide intended to help trainees request funds that may be available and, if they are available, request use of the training funds for continued professional development. [https://education.faes.org/contentManagement.do?method=load&code=CM000067 More details].