Protein details/Glycosylation: Difference between revisions

From GlyGen Wiki
Jump to navigation Jump to search
(First draft of the subpage.)
 
Line 2: Line 2:


== GlyGen portal ==
== GlyGen portal ==
[[File:Protein Glycosylation Screenshot.jpg|thumb|upright|Screenshot of the Glycosylation section on the [[Protein information]] page in GlyGen.]]
[[File:Protein_Glycosylation_Screenshot.jpg|thumb|upright|Screenshot of the Glycosylation section on the [[Protein information]] page in GlyGen.]]
Glycosylation is presented in 4 tabs on the [[Protein information]] page in GlyGen.
Glycosylation is presented in 4 tabs on the [[Protein information]] page in GlyGen.



Revision as of 03:00, 26 October 2021

The glycosylation section of the Protein information page in GlyGen provides the detailed list of glycosylation sites, reported glycans attached to the protein and predicted sites.

GlyGen portal

Screenshot of the Glycosylation section on the Protein information page in GlyGen.

Glycosylation is presented in 4 tabs on the Protein information page in GlyGen.

Reported Sites with Glycan

This tab shows a table with the following columns:

  • Source - GlyGen evidence linking to the databases and papers that provided the glycosyltation information
  • Type - ...
  • GlyTouCan ID - ...
  • Glycan Image - ...
  • Residue - ...
  • Note - ...

Reported Sites

Source of information

The following resources provided information that was integrated in GlyGen

  • UniProtKB - only reported sites information and predicted information is downloaed from UniProtKB
  • ...

Data access

Data from UniProtKB was downloaded using the UniProt API....

Data harmonization

Data filtering