GlyGen 2025 All Hands Meeting: Difference between revisions

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For entering the building '''ID''' is required. In the morning, GW members will be in the courtyard or near the security desk to sign you in and hand out your badges.
For entering the building '''ID''' is required. In the morning, GW members will be in the courtyard or near the security desk to sign you in and hand out your badges.


For any assistance call '''Urnisha (804-868-0809) or (Raja (703-608-9785)''' '''or''' '''Jeet (202-816-0104)'''
For any assistance call '''Urnisha (571-405-4023) or (Raja (703-608-9785)''' '''or''' '''Jeet (202-816-0104)'''


=== '''Virtual Meeting''' ===
=== '''Virtual Meeting''' ===
The Zoom Link will be used for the virtual attendees - <nowiki>https://georgetown.zoom.us/j/99846226862?pwd=VDFMZldybGNhTjYyWGVQZDhRZTd5dz09</nowiki>
The Zoom Link will be used for the virtual attendees - https://georgetown.zoom.us/j/92184602223


=== '''Group Dinner''' ===
=== '''Group Dinner''' ===
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= '''Agenda''' =
= '''Agenda''' =
'''<big>Fun activity</big>'''
To be added
= GlySpace Alliance Meeting (Tue June 10th) =
= GlySpace Alliance Meeting (Tue June 10th) =
Attendees: Mike, Kiyoko, Frederique, Rene, Raja
Attendees: Mike, Kiyoko, Frederique, Rene, Raja
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|-
|-
|'''1:00pm'''  
|'''1:00pm'''  
|'''GlySpace Alliance Meeting'''
|'''GlySpace Alliance Meeting (GW Room 402)'''
|-
|-
|'''''3:15pm'''''
|'''3:15pm'''
|'''''Coffee break''' (15mins)''
|'''''Coffee break''' (15mins)''
|-
|-
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|'''GlySpace Alliance Meeting (cont.)'''
|'''GlySpace Alliance Meeting (cont.)'''
|-
|-
|'''''5:00pm'''''
|'''5:00pm'''
|'''''Meeting Adjourned'''''
|'''''Meeting Adjourned'''''
|}
|}
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* Individual Introduction  
* Individual Introduction  
* Plan for the Meeting
* Plan for the Meeting
|Nathan, Mike/Rene/Raja (20min)
|Nathan, Jeet (20min)
|-
|-
|'''9:20am'''
|'''9:20am'''
|'''NIH Remarks'''
|'''NIH Remarks'''
|
|
* Introduction of NIH Guests
* Introductory remarks from NIH Guests
|NIH guest  (10min)
|NIH guest  (10min)
|-
|-
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|
|
* Portal
* Portal
|Mike (20min)
|-
|'''9:50am'''
|'''Year 3 progress'''
|
* Data
* Data
* CFDE
* CFDE
|Mike/Raja
|Raja (25min)
 
|-
(45min)
| colspan="4" |'''10:25am                                                                                                          Coffee break''' (15min)
|-
|-
|'''10:15am'''
|'''10:30am'''
|'''GlyGen Plans'''
|'''GlyGen Plans for Y4 2025 - Y5 2026'''
|
|
* Overall aims for GlyGen  
* Overall aims for GlyGen
* Year 4-5
* Year 4-5
|MikeT/Rene/Raja (30min)
|Rene (30min)
|-
| colspan="4" |'''10:45am                                                                                                          Coffee break''' (15min)
|-
|-
|'''11:00am'''
|'''11:00am'''
|'''Portal Year 2025-2026 Plan'''
|
* Portal Plans for 2025-2026
|MikeT/Rene (20min)
|-
|'''11:20am'''
|'''Data 2025-2026 Plan'''
|
* Data Plans for 2025-2026
|Urnisha (25min)
|-
|'''11:40am'''
|'''Open Discussion'''
|'''Open Discussion'''
|
|
* '''Discussion Session'''
* Discussion Session
|'''All''' (30min)
|All (60min)
|-
|-
|'''12:10pm'''
|'''12:00pm'''
| colspan="3" |'''Photo & Lunch break''' (60min)
| colspan="3" |'''Photo & Lunch break''' (60min)
|-
|-
|'''1:10am'''
|'''1:00pm'''
|'''Tool game/data'''
|'''Tool game/data'''
|
|
* What tools do we need for GlyGen
* What tools do we need for GlyGen
* What data do we need for GlyGen
* What data do we need for GlyGen
* Suggest 2 researchers for GlyGen Webinars
* Suggest 2 researchers for GlySpace Alliance Webinars
* How to measure success?
* How to measure success?
|Rene/Urnisha (50 min)
|Rene/Urnisha (50 min)
|-
|-
|'''2:00pm'''
|'''1:50pm'''
|'''Subcontract I – Protein and EBI interactions Data'''
|'''Subcontract I – Protein and EBI interactions Data'''
|
|
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* Testing
* Testing
* Publication/Outreach plans
* Publication/Outreach plans
|Vinicius/Maria (20min) via Zoom
|Vinicius/Maria (30min) via Zoom
|-
|-
|'''2:20pm'''
|'''2:20pm'''
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* Plans
* Plans
* Publication/Outreach plans
* Publication/Outreach plans
|Vijay Shanker (20min)
|Vijay Shanker (30min)
|-
|-
|'''2:40pm'''
|'''2:50pm'''
|'''Subcontract III - Glycan'''
|'''Subcontract III - Glycan'''
|
|
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|Nathan/Nicole (30min)
|Nathan/Nicole (30min)
|-
|-
|'''3:10pm'''
|'''3:20pm'''
| colspan="3" |'''Coffee break''' (15mins)
| colspan="3" |                                                                                                               '''Coffee break''' (15mins)
|-
|-
|'''3:10pm'''
|'''3:35pm'''
|'''GlyGen-PubChem-ChEBI'''
|'''GlyGen-PubChem-ChEBI'''
|
|
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* Current status on GlyGen ChEBI collaboration
* Current status on GlyGen ChEBI collaboration
* Plans
* Plans
|Evan, Kate and Urnisha (20mins)
|Evan, Kate (20mins)
|-
|-
|'''3:30pm'''
|'''3:55pm'''
|'''Discussion session'''
|'''Discussion session'''
|
|
* '''Discussion'''
* Discussion
|All (40 min)
 
 
|All (30 min)
|-
|-
|'''4:10pm'''
|'''4:25pm'''
|'''Collaboration plans between GlyGen and GlyCosmos/GlyTouCan'''
|'''Collaboration plans between GlyGen and GlyCosmos/GlyTouCan'''
|
|
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|Kiyoko (10min)
|Kiyoko (10min)
|-
|-
|'''4:20pm'''
|'''4:35pm'''
|'''Collaboration plans between GlyGen and GlyConnect/SIB'''
|'''Collaboration plans between GlyGen and GlyConnect/SIB'''
|
|
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|Frederique (10 min)
|Frederique (10 min)
|-
|-
|'''4:30pm'''
|'''4:45pm'''
|'''GlySpace'''
|'''GlySpace'''
|
|
|Raja, Mike, Kiyoko, Frederique, Rene
* What is GlySpace?
 
* GlySpace Mission, Aims and Goals
(15min)
* GlySpace's Collaboration
|Mike (10min)
|-
|-
|'''4:45pm'''
|'''4:55pm'''
|'''Open discussion'''
|'''Open discussion'''
|
|
* '''Discussion'''
* Discussion
|All (15 min)
|All (20 min)
|-
|-
|'''5:00pm'''
|'''5:15pm'''
| colspan="3" |'''Meeting Adjourned'''
| colspan="3" |'''Meeting Adjourned'''
|-
|-
|'''6:00pm'''
|'''5:45pm-6pm'''
| colspan="3" |'''Group Dinner - [https://ilcanale.com/ il Canale] ([https://www.google.com/maps?client=firefox-b-1-d&sca_esv=a22b124cb26f8e73&sca_upv=1&output=search&q=il+canale&source=lnms&entry=mc&ved=1t:200715&ictx=111 MAP]) (Georgetown) @ 6PM'''
| colspan="3" |'''Group Dinner - [https://ilcanale.com/ il Canale] ([https://www.google.com/maps?client=firefox-b-1-d&sca_esv=a22b124cb26f8e73&sca_upv=1&output=search&q=il+canale&source=lnms&entry=mc&ved=1t:200715&ictx=111 MAP]) (Georgetown) @ 5:45PM-6PM to 7:30PM'''
|}
|}


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|'''Presenter'''
|'''Presenter'''
|-
|-
| colspan="4" |'''8:30am                                                                                                      Breakfast'''
| colspan="4" |'''8:30am                                                    Breakfast'''
|-
|-
|'''9:00am'''
|'''9:00am'''
Line 303: Line 293:
* External Meetings
* External Meetings
* Webinars
* Webinars
* Workshops
* Talks
* Talks
* Google Analytics
* Google Analytics
|Kate (15min)
|Jeet (15min)
|-
|-
|'''9:30am'''
|'''9:30am'''
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|
|
* Overall Publication Plans
* Overall Publication Plans
|Mike/Raja (10min)
|Mike (10min)
|-
|-
|'''9:40am'''
|'''9:40am'''
|'''Discussion'''
|'''Education'''
|
|
* '''Discussion'''
* Volunteer Internship
|All (30min)
|-
|'''10:10am'''
|Education
|
* Volunteer  Internship
* CFDE Internship
* CFDE Internship
* Workshops?
* Workshops
|10 min
|Rene (15 min)
|-
|-
|'''10:20am'''
|'''9:55am'''
|Discussion
|'''Discussion'''
|
|
|10min
* Discussion (Next F2F?)
|All (35 min)
|-
|-
|'''10:30am'''
|'''10:30am'''
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|'''Glycan Function'''
|'''Glycan Function'''
|
|
* ontology
* Glycan Function Ontology
|Mike, Rene
|Mike (15min)
|-
|-
|'''11:00am'''
|'''11:00am'''
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* RFA
* RFA
* grant writing timeline
* grant writing timeline
|Rene, Raja, Mike
|Rene (40min)
|-
|-
|'''11:40am'''
|'''11:40am'''
|'''Open Discussion'''
|'''Open Discussion'''
|
|
* '''Discussion'''
* Discussion
|'''All''' (30min)
|All (30min)
|-
|-
|'''12:10pm'''
|'''12:10pm'''
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|-
|-
|'''9:00am'''
|'''9:00am'''
|'''Welcome'''
| colspan="3" |'''Developer meeting'''
|
* Welcome
|Robel and Rene
|-
|'''9:05am'''
|'''Review'''
|
* Tasks and To-do's
|Rene
|-
|'''9:15am'''
|'''Tasks'''
|
* Issue with mapping mutagenesis data from isoforms to SP entries #2240
* Adding strains and species data
* Google Analytics issues
* X-ref issues
* Go over all pending issues from past years
|All
|-
|'''10:25am'''
|'''Personal development time'''
|
* What did work, what did not, how can we make it better
|All
|-
|-
|'''12:10pm'''
|'''12:10pm'''
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|-
|-
|'''1:00pm'''
|'''1:00pm'''
| colspan="3" |To be added
| colspan="3" |'''Developer meeting'''
|-
|-
|'''5pm'''
|'''5pm'''
| colspan="3" |'''Meeting adjourned'''
| colspan="3" |'''Meeting adjourned'''
|}
|}

Latest revision as of 20:36, 10 June 2025

GlySpace Alliance and GlyGen All Hands Meeting 2025

The annual GlyGen All Hands meeting is scheduled for Wednesday and Thursday, June 11th and 12th, 2025. The GlySpace Alliance Meeting (GSA Members only) is scheduled for Tuesday June 11, 2025. The Developers Meeting (GlyGen Developers only) is scheduled for Thursday and Friday June 12 and June 13, 2025.

It is an exciting opportunity for all GlyGen collaborators to convene in person and dive into discussions about our future prospects and project plans for the upcoming year.

Program and Information

Meeting Venue

Room G1-001, 2115 Wisconsin Ave NW, Georgetown University (Map) (Parking)

Day 1 Wednesday June 11 - Room G1-001

Day 2 Thursday June 12 - Room G1-001 (Exec Meeting on 2nd Floor Conference Room)

Day 3 Wednesday June 13 - Room G1-001

GlySpace Alliance Meeting @ GW - Ross Hall 402

Driving to the Meeting Venue

Parking is at Colonial Parking - 2115 and 2121 Wisconsin Ave NW, Washington, DC 20007. (Parking) The parking ticket will be validated. Contact Jeet Vora.

NOTE: Entrance to the parking is behind the building, at the end of Whitehaven St. NW.

From Wisconsin Ave NW, southbound, turn left onto Whitehaven after the Wisconsin 2115 building entrance and Trader Joes.

From Wisconsin Ave NW, northbound, turn right onto Whitehaven after the Safeway and British School of Washington.

Follow Whitehaven around to the left. Parking is at end of Whitehaven St. NW.

Use the left lane to get a ticket, right lane is for monthly parkers only. You are entering on the G2 level. There will be many open spots on the G3 level. Use the elevators marked for 2115 Wisconsin (on your right after you enter the garage). Take the elevator to the G1 level. The room is adjacent to the elevators.

Parking 2115 and 2121 Wisconsin Ave NW, Washington, DC 20007
Entrance to the building from Wisconsin Ave
Front of the Building

Uber/Taxi:

Address: 2115 Wisconsin Ave NW, Washington, DC 20007 (Map)

Driver should pull into the driveway and pull up in the circle in front of the building. As you enter the building, the elevators are around the reception desk to the left. There is no need to check-in with reception. Take the elevators to the G1 level, the room is adjacent to the elevators. Alternatively, take the blue stairs next to the elevators down one level. The room is behind you.

On foot:

Address: 2115 Wisconsin Ave NW, Washington, DC 20007 (Map)

Walk in the driveway. Building is in front of you at the circle. As you enter the building, the elevators are around the reception desk to the left. There is no need to check-in with reception.

Take the elevators to the G1 level, the room is adjacent to the elevators.

Alternatively, take the blue stairs next to the elevators down one level. The room is behind you.


For entering the building ID is required. In the morning, GW members will be in the courtyard or near the security desk to sign you in and hand out your badges.

For any assistance call Urnisha (571-405-4023) or (Raja (703-608-9785) or Jeet (202-816-0104)

Virtual Meeting

The Zoom Link will be used for the virtual attendees - https://georgetown.zoom.us/j/92184602223

Group Dinner

Group Dinner on Day 1 June 11 will be at il Canale (In Georgetown) at 6PM. The restaurant is 7 mins drive and 23 mins walking from the meeting venue.

Address: 1065 31st St NW, Washington, DC 20007 (MAP)

Parking: 1054 31st St NW, Washington, DC 20007 (MAP)

There is a prix fix menu for the dinner which will be paid for by GlyGen.

Il Canale Restaurant

Alcoholic Drinks - Buy Your Own Drink.

Accommodation

Closest Hotel to the venue is the The Glover Park Hotel in Glover Park. Other hotels are in Georgetown and Foggy Bottom which are a short ride from the venue.

Meeting Venue and Hotel Map

Travel from DCA or IAD Airport:

The accommodation and meeting venue near/in Georgetown/Glover Park is approximately 7 miles away from Ronald Reagan National Airport (DCA) and 27 Miles from Dulles International Airport (IAD). A taxi ride should take around 20 minutes from DCA and 50 Minutes from IAD.

There is no Metro station near the venue. The closest Metro station is Foggy Bottom (2 miles away). The Metrorail Blue line connects the DCA airport and the Foggy Bottom Station, in direction of Largo Town Center. There is a Silver line metro that directly connects IAD Dulles Airport Station to Foggy Bottom Station, in direction of Largo Town Center) and takes about 60 mins from IAD. (Metro Map , WMATA)

Connecting to the WIFI

GuestNet

GuestNet provides Internet access for visitors, and for other users without NetIDs. The network is also available to current Georgetown students, faculty, staff, and other affiliates.

GU_Visitor

GU_Visitor provides Internet access for visitors at off-campus locations, and for other users without NetIDs. The network is also available to current Georgetown students, faculty, staff, and other affiliates.

GU_Visitor permits access to the Internet only. In order to access Georgetown online services (e.g., Georgetown Google Mail, Box, Canvas), use SaxaNet.

GU_Visitor is password-protected. Users who wish to connect to GU_Visitor should contact an administrative assistant in covered areas for login information.

Eduroam

Georgetown is a member of the Eduroam network, which is comprised of US and international higher education and research institutions.

Access to the Eduroam network is available to visiting students, faculty, and staff from higher education and research institutions that are part of the Eduroam network.

Agenda

GlySpace Alliance Meeting (Tue June 10th)

Attendees: Mike, Kiyoko, Frederique, Rene, Raja

Time (ET) Agenda
1:00pm GlySpace Alliance Meeting (GW Room 402)
3:15pm Coffee break (15mins)
3:30pm GlySpace Alliance Meeting (cont.)
5:00pm Meeting Adjourned

Day 1 All Hands Main Meeting (Wed June 11th)

Time (ET) Agenda Description Presenter
8:30am                                                                                                      Breakfast
9:00am Welcome
  • Welcome
  • Individual Introduction
  • Plan for the Meeting
 Nathan, Jeet (20min)
9:20am NIH Remarks
  • Introductory remarks from NIH Guests
 NIH guest  (10min)
9:30am Year 3 progress
  • Portal
 Mike (20min)
9:50am Year 3 progress
  • Data
  • CFDE
 Raja (25min)
10:25am                                                                                                          Coffee break (15min)
10:30am GlyGen Plans for Y4 2025 - Y5 2026
  • Overall aims for GlyGen
  • Year 4-5
 Rene (30min)
11:00am Open Discussion
  • Discussion Session
 All (60min)
12:00pm Photo & Lunch break (60min)
1:00pm Tool game/data
  • What tools do we need for GlyGen
  • What data do we need for GlyGen
  • Suggest 2 researchers for GlySpace Alliance Webinars
  • How to measure success?
 Rene/Urnisha (50 min)
1:50pm Subcontract I – Protein and EBI interactions Data
  • Summary
  • Protein Data Plan
  • Testing
  • Publication/Outreach plans
 Vinicius/Maria (30min) via Zoom
2:20pm Subcontract II - Lit. Mining
  • Summary
  • Plans
  • Publication/Outreach plans
 Vijay Shanker (30min)
2:50pm Subcontract III - Glycan
  • Summary
  • Glycan Data Plan
  • Glycan Image Extractor (Nicole)
  • GlycoTree/Sandbox
  • Publication/Outreach plans
 Nathan/Nicole (30min)
3:20pm Coffee break (15mins)
3:35pm GlyGen-PubChem-ChEBI
  • Current status on GlyGen PubChem collaboration
  • Current status on GlyGen ChEBI collaboration
  • Plans
 Evan, Kate (20mins)
3:55pm Discussion session
  • Discussion


 All (30 min)
4:25pm Collaboration plans between GlyGen and GlyCosmos/GlyTouCan
  • Current status
  • Future plans
  • Grant submission ideas
  • Publications
 Kiyoko (10min)
4:35pm Collaboration plans between GlyGen and GlyConnect/SIB
  • Current status
  • Future plans
  • Grant submission ideas
  • Publications
 Frederique (10 min)
4:45pm GlySpace
  • What is GlySpace?
  • GlySpace Mission, Aims and Goals
  • GlySpace's Collaboration
 Mike (10min)
4:55pm Open discussion
  • Discussion
 All (20 min)
5:15pm Meeting Adjourned
5:45pm-6pm Group Dinner - il Canale (MAP) (Georgetown) @ 5:45PM-6PM to 7:30PM

Day 2 All Hands Main Meeting Cont. (Thurs June 12th)

Time (ET) Agenda Description Presenter
8:30am                                                    Breakfast
9:00am Welcome
  • Welcome
 MikeT & Raja (5min)
9:05am Review day 1
  • Tasks and To-do's
 Rene (10min)
9:15am Outreach
  • Status of Year 3 outreach
  • External Meetings
  • Webinars
  • Talks
  • Google Analytics
 Jeet (15min)
9:30am Publication plans
  • Overall Publication Plans
 Mike (10min)
9:40am Education
  • Volunteer Internship
  • CFDE Internship
  • Workshops
 Rene (15 min)
9:55am Discussion
  • Discussion (Next F2F?)
 All (35 min)
10:30am Coffee break (15 min)
10:45am Glycan Function
  • Glycan Function Ontology
 Mike (15min)
11:00am GlyGen 3 discussion
  • Topics
  • RFA
  • grant writing timeline
 Rene (40min)
11:40am Open Discussion
  • Discussion
 All (30min)
12:10pm Executive session with advisors / Lunch break (80min)
1:30pm-5pm GlyGen Developers Meeting (go over all open tickets)

Day 3 GlyGen Developers Meeting (Fri June 13th)

Time (ET) Agenda Description Presenter
Morning Session                                                                                                    
9:00am Developer meeting
12:10pm Lunch break
1:00pm Developer meeting
5pm Meeting adjourned
Retrieved from "https://wiki.glygen.org/index.php?title=GlyGen_2025_All_Hands_Meeting&oldid=3300"